I will conduct molecular docking gromacs MD simulation
Network pharmacology, Molecular docking, GROMACS MDsimulation, TCMtarget predict
Informazioni su questo servizio
I am a second-year Master student majoring in Chinese Materia Medica at Northwest University, supervised by Professor Wang Yonghua, the founder of the TCMSP database. With 2 years of lab research experience and 1.5 years of freelance academic service, I have completed more than 600 molecular simulation projects for graduate thesis and journal publication.
I provide full computational pharmacology services covering three core modules:
- Molecular Docking: AutoDock Vina/4 protein-ligand docking, ligand & protein pretreatment, binding affinity ranking, 2D interaction diagrams and PyMOL 3D visualization.
- GROMACS MD Simulation: 100ns trajectory simulation for protein-ligand, peptide and protein-protein systems, complete RMSD, RMSF, Rg, SASA and hydrogen bond analysis.
- MM/PBSA Binding Free Energy: Residue energy decomposition, conformation snapshot extraction and quantitative binding capacity evaluation.
All packages deliver raw parameter files, editable high-resolution vector figures, sorted data tables and step-by-step operation guides. I offer unlimited text consultation and one free round of figure revision for every order. Full MD trajectory files are available for extra purchase.
FAQ
What files will I receive after delivery?
You will get all raw simulation parameter files, editable HD figures, Excel data tables.
Can you adjust simulation time length (not only 100ns)?
Yes, 50ns/100ns/200ns simulation duration can be customized, extra fees apply for longer trajectories.
Is figure revision free of charge?
One free full figure revision is included in every package; extra modification requests are charged separately.
Do you support TCM network pharmacology analysis?
Yes, full network pharmacology workflow (target prediction, GO/KEGG enrichment, PPI network) can be added as an extra service.
Can you provide one-on-one tutoring for simulation operation?
Tutoring service is fully included in the Premium package. If you place Basic or Standard orders, one-on-one tutoring needs to be purchased as an extra paid add-on service.

